O'Halloran, Damien: search on Z-Library

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1

Genome aware CRISPR gRNA target prediction for parasitic nematodes

O’Halloran, Damien M.

Journal:

Molecular and Biochemical Parasitology

Year:

2019

Language:

english

File:

PDF, 1.01 MB

english, 2019

2

NemaCount: quantification of nematode chemotaxis behavior in a browser

O’Halloran, Damien M.

Journal:

Invertebrate Neuroscience

Year:

2016

Language:

english

File:

PDF, 1.35 MB

english, 2016

3

Isolation and characterization of a naturally occurring multidrug-resistant strain of the canine hookworm, Ancylostoma caninum

Kitchen, Shannon, Ratnappan, Ramesh, Han, Suhao, Leasure, Caitlyn, Grill, Emilia, Iqbal, Zahra, Granger, Olivia, O'Halloran, Damien M., Hawdon, John M.

Journal:

International Journal for Parasitology

Year:

2019

Language:

english

File:

PDF, 1.11 MB

english, 2019

4

The Molecular Phylogeny of a Nematode-Specific Clade of Heterotrimeric G-Protein α-Subunit Genes

Damien M. O’Halloran, David A. Fitzpatrick, Grace P. McCormack, James O. McInerney, Ann M. Burnell

Journal:

Journal of Molecular Evolution

Year:

2006

Language:

english

File:

PDF, 545 KB

english, 2006

5

RNAi-mediated gene knockdown by microinjection in the model entomopathogenic nematode Heterorhabditis bacteriophora

Ratnappan, Ramesh, Vadnal, Jonathan, Keaney, Melissa, Eleftherianos, Ioannis, O’Halloran, Damien, Hawdon, John M.

Journal:

Parasites & Vectors

Year:

2016

Language:

english

File:

PDF, 1.25 MB

english, 2016

6

Article Commentary: Nematode Sodium Calcium Exchangers: A Surprising Lack of Transport

Sharma, Vishal, O'Halloran, Damien M.

Journal:

Bioinformatics and Biology Insights

Year:

2016

Language:

english

File:

PDF, 355 KB

english, 2016

7

Investigating the Relationship between Topology and Evolution in a Dynamic Nematode Odor Genetic Network

Fitzpatrick, David A., O'Halloran, Damien M.

Journal:

International Journal of Evolutionary Biology

Year:

2012

Language:

english

File:

PDF, 951 KB

english, 2012

8

A Practical Guide to Phylogenetics for Nonexperts

O'Halloran, Damien

Journal:

Journal of Visualized Experiments

Year:

2014

Language:

english

File:

PDF, 1.37 MB

english, 2014

9

Recent structural and functional insights into the family of sodium calcium exchangers

Sharma, Vishal, O'Halloran, Damien M.

Journal:

Year:

2014

Language:

english

File:

PDF, 1016 KB

english, 2014

10

Contribution of the cyclic nucleotide gated channel subunit, CNG-3, to olfactory plasticity in Caenorhabditis elegans

O’Halloran, Damien M., Altshuler-Keylin, Svetlana, Zhang, Xiao-Dong, He, Chao, Morales-Phan, Christopher, Yu, Yawei, Kaye, Julia A., Brueggemann, Chantal, Chen, Tsung-Yu, L’Etoile, Noelle D.

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 2.37 MB

english, 2017

11

Refined ab initio gene predictions of Heterorhabditis bacteriophora using RNA-seq

Vadnal, Jonathan, Granger, Olivia G., Ratnappan, Ramesh, Eleftherianos, Ioannis, O'Halloran, Damien M., Hawdon, John M.

Journal:

International Journal for Parasitology

Year:

2018

Language:

english

File:

PDF, 1019 KB

english, 2018

12

An inducible model of human amylin overexpression reveals diverse transcriptional changes

Aldras, Yoseph, Singh, Sanghamitra, Bode, Katrin, Bhowmick, Diti Chatterjee, Jeremic, Aleksandar, O’Halloran, Damien M.

Journal:

Neuroscience Letters

Year:

2019

File:

PDF, 482 KB

2019

13

Simulation model of CA1 pyramidal neurons reveal opposing roles for the Na+/Ca2+ exchange current and Ca2+-activated K+ current during spike-timing dependent synaptic plasticity

OâHalloran, Damien M., Annunziato, Lucio

Journal:

Year:

2020

File:

PDF, 1.85 MB

2020

14

An injectable cross-linked scaffold for nucleus pulposus regeneration

Damien O. Halloran, Sibylle Grad, Martin Stoddart, Peter Dockery, Mauro Alini, Abhay S. Pandit

Journal:

Year:

2008

Language:

english

File:

PDF, 537 KB

english, 2008

15

PrimerView: high-throughput primer design and visualization

O’Halloran, Damien M.

Journal:

Source Code for Biology and Medicine

Year:

2015

Language:

english

File:

PDF, 1.37 MB

english, 2015

16

Invading and Expanding: Range Dynamics and Ecological Consequences of the Greater White-Toothed Shrew (Crocidura russula) Invasion in Ireland

McDevitt, Allan D., Montgomery, W. Ian, Tosh, David G., Lusby, John, Reid, Neil, White, Thomas A., McDevitt, C. Damien, O'Halloran, John, Searle, Jeremy B., Yearsley, Jon M., Fenton, Brock

Journal:

Year:

2014

Language:

english

File:

PDF, 1.04 MB

english, 2014

17

Nuclear entry of a cGMP-dependent kinase converts transient into long-lasting olfactory adaptation

Jin I. Lee, Damien M. O'Halloran, Jeffery Eastham-Anderson, Bi-Tzen Juang, Julia A. Kaye, O. Scott Hamilton, Bluma Lesch, Andrei Goga, Noelle D. L'Etoile and Cornelia Bargmann

Journal:

Proceedings of the National Academy of Sciences

Year:

2010

Language:

english

File:

PDF, 1.52 MB

english, 2010

18

STITCHER 2.0: primer design for overlapping PCR applications

O’Halloran, Damien M., Uriagereka-Herburger, Isabel, Bode, Katrin

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 981 KB

english, 2017

19

Nuclear PKG localization is regulated by Go alpha and is necessary in the AWB neurons to mediate avoidance in Caenorhabditis elegans

He, Chao, O’Halloran, Damien M.

Journal:

Neuroscience Letters

Year:

2013

Language:

english

File:

PDF, 978 KB

english, 2013

20

Multiple lineage specific expansions within the guanylyl cyclase gene family

David A Fitzpatrick, Damien M O'Halloran, Ann M Burnell

Journal:

BMC Evolutionary Biology

Year:

2006

Language:

english

File:

PDF, 576 KB

english, 2006

21

NCX-DB: a unified resource for integrative analysis of the sodium calcium exchanger super-family

Bode, Katrin, O’Halloran, Damien M.

Journal:

BMC Neuroscience

Year:

2018

Language:

english

File:

PDF, 1.53 MB

english, 2018

22

A putative UDP-glycosyltransferase from Heterorhabditis bacteriophora suppresses antimicrobial peptide gene expression and factors related to ecdysone signaling

Kenney, Eric, Yaparla, Amulya, Hawdon, John M., OâHalloran, Damien M., Grayfer, Leon, Eleftherianos, Ioannis

Journal:

Scientific Reports

Year:

2020

File:

PDF, 1.24 MB

2020

23

A putative lysozyme and serine carboxypeptidase from Heterorhabditis bacteriophora show differential virulence capacities in Drosophila melanogaster

Kenney, Eric, Yaparla, Amulya, Hawdon, John M., Oâ Halloran, Damien M., Grayfer, Leon, Eleftherianos, Ioannis

Journal:

Developmental & Comparative Immunology

Year:

2021

File:

PDF, 4.38 MB

2021

24

A Molecular Readout of Long-term Olfactory Adaptation in C. elegans

He, Chao, Lee, Jin I., L'Etoile, Noelle, O'Halloran, Damien

Journal:

Journal of Visualized Experiments

Year:

2012

Language:

english

File:

PDF, 346 KB

english, 2012

25

A comparative study of the molecular evolution of signalling pathway members across olfactory, gustatory and photosensory modalities

HE, CHAO, FITZPATRICK, DAVID A., O’HALLORAN, DAMIEN M.

Journal:

Journal of Genetics

Year:

2013

Language:

english

File:

PDF, 775 KB

english, 2013

26

An In Vitro Evaluation of Fracture Reduction Achieved by Inflatable Bone Tamps under Simulated Physiological Load

Gordon, Michael, Peppelman, Walter C., Beutler, William, Halloran, Damien O., Chintakunta, Suresh R., Bucklen, Brandon

Journal:

Journal of Spinal Disorders & Techniques

Year:

2013

Language:

english

File:

PDF, 2.13 MB

english, 2013

27

Transcriptomic analysis of hookworm Ancylostoma ceylanicum life cycle stages reveals changes in G-protein coupled receptor diversity associated with the onset of parasitism

Bernot, James P., Rudy, Gabriella, Erickson, Patti T., Ratnappan, Ramesh, Haile, Meseret, Rosa, Bruce A., Mitreva, Makedonka, O'Halloran, Damien M., Hawdon, John M.

Journal:

International Journal for Parasitology

Year:

2020

File:

PDF, 2.02 MB

2020

28

Tissue-Engineering Approach to Regenerating the Intervertebral Disc

O'Halloran, Damien M., Pandit, Abhay S.

Journal:

Tissue Engineering

Year:

2007

Language:

english

File:

PDF, 647 KB

english, 2007

29

Module for SWC neuron morphology file validation and correction enabled for high throughput batch processing

OâHalloran, Damien M., Tang, Fulei

Journal:

Year:

2020

File:

PDF, 1.37 MB

2020

30

Isolation and characterization of a naturally occurring multidrug-resistant strain of the canine hookworm, Ancylostoma caninum

Kitchen, Shannon, Ratnappan, Ramesh, Han, Suhao, Leasure, Caitlyn, Grill, Emilia, Iqbal, Zahra, Granger, Olivia, O'Halloran, Damien M., Hawdon, John M.

Journal:

International Journal for Parasitology

Year:

2019

File:

PDF, 1.11 MB

2019

31

The cyclic nucleotide gated channel subunit CNG-1 instructs behavioral outputs in Caenorhabditis elegans by coincidence detection of nutritional status and olfactory input

He, Chao, Altshuler-Keylin, Svetlana, Daniel, David, O’Halloran, Damien

Journal:

Neuroscience Letters

Year:

2016

Language:

english

File:

PDF, 957 KB

english, 2016

32

fastQ_brew: module for analysis, preprocessing, and reformatting of FASTQ sequence data

O’Halloran, Damien M.

Journal:

BMC Research Notes

Year:

2017

Language:

english

File:

PDF, 971 KB

english, 2017

33

Enzymatic stabilization of gelatin-based scaffolds

Emmett P. Broderick, Damien M. O'Halloran, Yury A. Rochev, Martin Griffin, Russell J. Collighan, Abhay S. Pandit

Journal:

Journal of Biomedical Materials Research Part B: Applied Biomaterials

Year:

2005

Language:

english

File:

PDF, 88 KB

english, 2005

34

PrimerMapper: high throughput primer design and graphical assembly for PCR and SNP detection

O’Halloran, Damien M.

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 1.80 MB

english, 2016

35

Characterization of a Microbial Transglutaminase Cross-linked Type II Collagen Scaffold

O Halloran, Damien M., Collighan, Russell J., Griffin, Martin, Pandit, Abhay S.

Journal:

Tissue Engineering

Year:

2006

Language:

english

File:

PDF, 927 KB

english, 2006

36

Regulators of AWC-Mediated Olfactory Plasticity in Caenorhabditis elegans

O'Halloran, Damien M., Altshuler-Keylin, Svetlana, Lee, Jin I., L'Etoile, Noelle D., Chisholm, Andrew D.

Journal:

Year:

2009

Language:

english

File:

PDF, 1.26 MB

english, 2009

37

The NCLX-type Na + /Ca 2+ Exchanger NCX-9 Is Required for Patterning of Neural Circuits in Caenorhabditis elegans

Sharma, Vishal, Roy, Soumitra, Sekler, Israel, O'Halloran, Damien M.

Journal:

Journal of Biological Chemistry

Year:

2017

Language:

english

File:

PDF, 7.33 MB

english, 2017

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